Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829626.1_cds_XP_016503827.1_17332
CDS Infomation

[gene=LOC107821884] [db_xref=GeneID:107821884] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016503827.1] [location=complement(5503..6957)] [gbkey=CDS]
Sequence

ATGTCAAGACAAGATAATGAAGATATGCATCAACGAATAATACCAAAAATTCCATCATTC
ATGAGACTTAAGAAGAGCGATGAATATGATCCTAAAGTCATGTCATTGGGGCCTTACCAC
CATGGAAAAAAAGAGCTCGAATTTGTTGAAGATTTCAAGCCCAAGGCTCTACAAATGTTC
ATTGAAGGCAGTGATAAGGATTACGATTTCTTCCTCGAGAAAATTCTCGAGGAGATCGAA
CGTGCTAAAAGTTGTTACCTCGAAGAATTCACGAGCAAATATCACGACTGTGATTTTGCT
CGAATGATGCTCCTTGACGCGTGCTTCGTGCTAATGGATATCGAGATAGTAACAGAGTTC
TCAAAGTCATGGGAAAAGAAATGTTCTTTCACAAAAGAACATCTTGGTGTAGCAGGTTAT
TGTGCTGCTGTACATGACCTATATTTGCTTGAAAATCAGGTACCGTTTTGGATTCTCAAA
CTCTTGTTTAATTTGAGATATGTTAAAGATTATAGTATATCATATGATCATCAATTTGAG
GATATAATGCAACACTATTGTTCTTATCTTTGTTTCGGAGATCATAGATTATACAAACAA
TATTGGGAAACAGAACCCCCTCACTTATTTGAAGTTTTCCGAAGAGAACTAATTATCTCT
GGTGACAACAATAAAGATGATTATCTTATGCAACAACGTCGTCATCATCAGCCCCCTGCC
TCTAGCCTCAGTGGATCATTTAGTGATATATGGAAAAAAAAAGTACAAAACATTAAAAAA
GCTACTAATTCGCAAATTAATTCAGGGTGCTTAGGTCGATATTGCTGTATAAGGAAAAAA
CGTCATCACAAACCAAAAACACCACGATGTGTGTTTCGTTCAGTGATCGAGCTGAAATCA
AAGGGCATTCATTTCAGGCGTAGCCCTGTGAATTCTTTCAATTGTGGTGCAAAGTTTCAC
TCTCATTGTTACTATACAGAACTTTGGCTTCCGCCTTGGTACGTTTCATCGGTTACTAAA
ACAGCTCTGCAGAATATGATAGCTTATGAAATTTGTCCGAATAGCGTAAACCATGGAGAT
ATTTCTGTGACATCTTACATAAGTTTTATGAAAGCACTTATTACATCACCAAATGATGTG
AAAGAGCTACGAGAAAAGGAGATTATAATCAATTATTTGGGAAGTGATGAAGAAGTTGTA
CAAGTTTTCAGATCAGTAAACACTTATGGGATATGGGGTCAATCTAGCTTTGATGAAATC
AATTTGAAAATCAAAGAGCACTTTCACAGCAGGGCCAGGACTTGGTTTGCTGAATTGGTA
AATGCTTATTTTACAAGTCCTTGGTCTCTAATCACTTTGATTGCTGCTACTTTCCTCCTT
TTTCTTGCTATGGTCCAGGCCTTCTATGCATCTCCATTACATAATTTACATCCTTCTAAA
AAATTCCGATATTGA

Peptide Sequence

PEP ID

XP_016503827.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MSRQDNEDMHQRIIPKIPSFMRLKKSDEYDPKVMSLGPYHHGKKELEFVEDFKPKALQMF
IEGSDKDYDFFLEKILEEIERAKSCYLEEFTSKYHDCDFARMMLLDACFVLMDIEIVTEF
SKSWEKKCSFTKEHLGVAGYCAAVHDLYLLENQVPFWILKLLFNLRYVKDYSISYDHQFE
DIMQHYCSYLCFGDHRLYKQYWETEPPHLFEVFRRELIISGDNNKDDYLMQQRRHHQPPA
SSLSGSFSDIWKKKVQNIKKATNSQINSGCLGRYCCIRKKRHHKPKTPRCVFRSVIELKS
KGIHFRRSPVNSFNCGAKFHSHCYYTELWLPPWYVSSVTKTALQNMIAYEICPNSVNHGD
ISVTSYISFMKALITSPNDVKELREKEIIINYLGSDEEVVQVFRSVNTYGIWGQSSFDEI
NLKIKEHFHSRARTWFAELVNAYFTSPWSLITLIAATFLLFLAMVQAFYASPLHNLHPSK
KFRY

Transcript Sequence

Gene sequence data has not been registered.